Global Helicobacter pylori Omics-Phenotype Database

H. pylori SRA Sequencing Dataset

Whole-genome sequencing data from public SRA archives. Includes genome assembly, variant calling, antimicrobial resistance detection and MLST typing for 17 H. pylori isolates.

17 Isolates WGS · Illumina Japan · DRA AMR · MLST
Dataset Overview
Loading statistics…

Q30 Rate Distribution (After QC)

GC Content Distribution

Genome Assembly Statistics

Genome Size per Sample (bp)

Contig Count per Sample

CDS Count per Sample

rRNA Count per Sample

tRNA Count per Sample

Variant Analysis

SNP & InDel Counts per Sample

SNP vs InDel Proportion

AMR Detection & MLST Typing

MLST Sequence Type Distribution

AMR Gene Hits per Sample

All Samples — Full Data

17 H. pylori SRA Samples

Sample ID Reads (after QC) Q30 Rate GC % Genome (bp) Contigs CDS SNPs InDels MLST ST Detail Download
Loading…